Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRPDSDAAPYEPVLEQTAQAWLVRLRGTPDAATRRAFEDWLAQRPAHAEAYARAEALWRLTEIPASRLAIEEADALEAYLRPRRASRNPRRWAYPLASVACLLAMLWLGGWWQPGDWLQDWRADYVAAPGQVAEWKLADGSYLSLDAGSAVRVRIDGGQRRVELLRGAAALRVKRDALPFVVEAGEGRARVLGTEFEVRRGAGATRVTVLQGRVAVSAGTGAGAAEEVLGAGQQVGFADGKLGRPVAIDAAAALAWRQGWLSFYRRPLAEVLDELARYYPGRILLLDDALGRQPVSGSFRSDDPEAALKSLQAVLGYRQQILFGRLVVIR |
| 2Y3M Chain:A ((8-75)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSIRLKQAPLVPTLQQLALAHNTNLIID-------TVSLQLENVDLDQLFRSVAKIKQLDLWQENGIYYFTK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y3M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19607 for 329 contacts (-59.6/contact) +
2D Compatibility (PS) -6815 + (NN) -3130 + (LL) 19956
1D Compatibility (HY) -2800 + (ID) 500
Total energy: -12896.0 ( -39.20 by residue)
QMean score : 0.223
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