Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDLAQNPPAVRTVLAGLMLSIFLSALDQTIVAVSLPAISADYADLDLLAWVISAYMVAMTVSMPIYGKLGD-LYGRRRLMLFAIVVFTAASLLCGLAQSMGQLVLARVLQGIGAGGLMAVSQAIIGDIVPPRERGRYQGY--FSSMYAIASVAGPVLGGLLTEYLSWHWVFW---INLPIGLLALAISRRTLVGLP---VPRR-QPVIDYLGIVLMVVG--LTALLLAITQIGQGAAWSDPALLGLFALAALALLLFVAQERRFREPLVPMQLFAVRAATLSWLVAFFASFQAISLTVLVPLRYQSVTGAGADSAALHLLPLVMGLPLGAYCCGRLTASLGRYKPLILLGAVLLPCGIAGLALVPVGDHWLSGLCMLLTGIAIGTQFPTSLVAAQNAVEQRHIGVATSNATLFRSLGGAVGVALMSAILLALLKHLRIGGGLDQGFSESALLSSLDAASGPARVILQHVLADAFKVLFLVNAAVALLGLAVASALPDMTLRGRGATQPTAGE |
| 4IKV Chain:A ((62-247)) | --------------------------------------------DEHLALAIMSIYGALVYMSGIIGGWLADRVFGTSRAVFYGGLLIMAGHIALAIPGGVAALFVSMALIVLGTGLLKPNVSSIVGDMYKPGDDRRDAGFSIFYMGINLGAFLAPLVVGTAGMKYNFHLGFGLAAVGMFLGLVVFVATRKKNLGLAGTYVPNPLTPAEKKKAAAIMAVGAVVIAVLLAILIPNGWFTVETFISLVGILGIIIPIIYFVVMYRSPKTTAEERSRVIAYIPLFVASAMFWAIQEQGSTILANYADKRTQLDVAGIHLSPAWFQSLNPLFIIILAPVFAWMWVKLGKRQPTIPQKFALGLLFAGLSFIVILVPGHLSGGGLVHPIWLVLSYFIVVLGELCLSPVGLSATTKLAPAAFSAQTMSLWFLSNAAAQAINAQLVRFYTPENETAYFGTIGGAALVLGLILLAIAPRIGRLMK------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4IKV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -108096 for 1082 contacts (-99.9/contact) +
2D Compatibility (PS) -17785 + (NN) -6121 + (LL) 7476
1D Compatibility (HY) -11600 + (ID) 2200
Total energy: -138326.0 ( -127.84 by residue)
QMean score : 0.177
|
|
|