Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPRLSALLFLALAPWLAQAEETLRVYNWNDYIDPQVLESFQKDTGIRVEYHTFATAEELDKALRS-GEAIDVAVPSHDTLPALLKDNLLRPLDFTQLPNRSHLDRQLLSKLAAVDPDNRHAVPYLWGAVGLAINTPQAEAAYGGPLPNSWSLLFDASQSQRLKSCGISLLDAPDETLAILLNYQGRNLGRTAPSQVRRAAEALHGLRPNLRY----VDSERYIADLEGGRLCLAMAWVGDALRAAKAGQPVSFEVPQEGSVLFIDNLVIPAGAQHPREAHRFIDYLMQPKIAAQITAATLYPSGNADAAGFLDPALRQQPGLYPDRDTSRRLFALETPPEKLRPVVDEIWKAFRGASH |
4EQ7 Chain:A ((22-312)) | -------------------------------------EKFMVETGINVLQDGPTDYGKLKAMVEANGVTWDVVDVEGDYAAQAGPKGLLEKLDFSVI-DKTKLDPRFVTD---------YSVGSFYYSFVIGCNVDSVSAC-----PKSWADLFDTAKFPGKRT--FYKWSAPGVIEAALLA-DGVTADKLYPLDLDRAFKKLDTIKSDIIWWSGGAQSQQLIASAEA---PFGSVWNGRMTALEQSG--VKVETSWAQNITAADSLVVPKGTKNKDAAMKFIALATSAQAQADMATATGYAPVNIESAKLMDPKIAKS---LPDQQTESQVNADMNYWAQHRDEIGERWYAWQAKHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EQ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97844 for 2369 contacts (-41.3/contact) +
2D Compatibility (PS) -30716 + (NN) -16108 + (LL) 3444
1D Compatibility (HY) -9600 + (ID) 3500
Total energy: -154324.0 ( -65.14 by residue)
QMean score : 0.453
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