Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVVRRYPLALLLGMAGALADELPDGSLLQRYGVQADQLPTLAADPPSRKEEKETPSRFRVEPEQPLVTFGVKDHKGMEPTGNPSIDAMHERDRRICRNIRRQALEKGKAQPFDGYIECP
1Q0C Chain:A ((260-311))
--------------------------------------------DPDNHRIEIYTQDYYTGDPDNPTITWNVHDNQRRDWWGNPVVPSWYTEASKVLDLDGNVQEII-------------
General information:
TITO was launched using:
RESULT:
Template:
1Q0C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10992 for 179 contacts (61.4/contact) +
2D Compatibility (PS) -5589 + (NN) -5234 + (LL) 4440
1D Compatibility (HY) -1600 + (ID) 600
Total energy: 2409.0 ( 13.46 by residue)
QMean score : 0.394
(partial model without unconserved sides chains):
PDB file :
Tito_1Q0C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q0C-query.scw
PDB file :
Tito_Scwrl_1Q0C.pdb
: