Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQASSTDTPFVIAGRTYGSRLLVGTGKYKDLDETRRAIEASGAEIVTVAVRRTNIGQNPDEPNLLDVIPPDRYTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIG--CIAVMPLAGLIGSGLGI--CNPYNLRIILEEAK-----VPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMKHAIVAGRLAYLAGRMPRKLYASASSPLDGLID |
| 1HG3 Chain:A ((97-214)) | ---------------------------------------------------------------------------------------------------------------SENRMILADLEAAIRRAEEV---GLMTMV-CSNNPAVSAAVAALNPDYVAVEP-PELIGTGIPVSKAKPEVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTKAKDPEKAIWDLVSGI----------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1HG3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -88417 for 783 contacts (-112.9/contact) +
2D Compatibility (PS) -12451 + (NN) -4982 + (LL) 10556
1D Compatibility (HY) -8400 + (ID) 1750
Total energy: -105444.0 ( -134.67 by residue)
QMean score : 0.355
|
|
|