Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYSRIALFGGFAAAALLAGCSASSGKPGGKDWTRWTCDSKAVIEWRYIDGSKNIVDLRLKDEDDVVHHLEQEPAAVGAFYSD----GRLGFHLENDEGLVYWVETDDLIGRGCKAR |
4R4J Chain:A ((282-327)) | --------------------------------------------------------------EDDVAHQIY--PQAINAVGSRDTFVGRIRKDLDAEKGIHMWVVSDNLLKGAAWNS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5564 for 195 contacts (28.5/contact) +
2D Compatibility (PS) -4381 + (NN) -704 + (LL) 3568
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -3.0 ( -0.02 by residue)
QMean score : -0.045
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