Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPAMRTGLLCALLGVTAPAWAEYVTVISFGGANKEAQETAFYKPFKSATGNRVVHGSYNGDLAKLKRMVEISHVSWDVVEVEAPELARGCEEGLFEKLDMAKV----GDPADFVPGAVQPCG-VGI-FVWTTL-LAYNPGKVAGSPQGWADFWDVKKFPGKRGLRWGAKYSLEFALMADGVAPKDVYQTLATPAGVERAFRKLDELKPYIHWWKSGQDPVRD-LADGTVVMSSAYNGRIAAAQAEKQRLAMVWSGGVYD--FDFWALPVGVWKKQLAEEFIRFASQPEQQKAFAENIAYGPANRKAVGLLDPQVAANLPTAPQNMQNAVGMNVAFWAEHGEALEQRFQNWAKR |
| 4EQB Chain:A ((28-284)) | ---------------------------------------------FTEETGIQVQYETFDSNEAMYTK-IKQGGTTYDIAIPSEYMINKMKDEDLLVPLDYSKIEGIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKL-EYKNSIMLFDGAREVLGLGLNSLGYSLNS-----KDPQQLEETVDKLYKLTPNIKAIVA--DEMKGYMIQNNVAIGVTFSGEASQMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQDSAYAFINFMLKPENALQNAEYVGYSTPNLPAKELLPEETKEDKAFYPDVETMKHLEVYEKFDHKWTGKYSDLFLQFKM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63554 for 1817 contacts (-35.0/contact) +
2D Compatibility (PS) -27432 + (NN) -16244 + (LL) 4392
1D Compatibility (HY) -15200 + (ID) 2950
Total energy: -120988.0 ( -66.59 by residue)
QMean score : 0.416
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