Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDTLAPESTRQNLRSQRLNLLTNEPHQRLESLV---KSKEPFASRDNFARFVAAQYLFQHDLEPLYRNEALARL--FPGLASRARDDAARADLADLGHPVPEGDQ-SVREAD-------------LSLAEALGWLFVS-EGSKLGAAFLFKKA-AALELDEN-FGARHLAEPEGGRAQGWKSFVAILDGIELNEEEERLAAKGASDAFNRFGDLLERTFA
1WZD Chain:A ((7-211))
------------GLAVELKQSTAQAHEKAEHSTFMSDLLKGRLGVAEFTRLQEQAWLFYTALEQAVDAVRASGFAESLLDPALNRAEVLARDLDKLNGSSEWRSRITASPAVIDYVNRLEEIRDNVDGPALVAHHYVRYLGDLSGGQVIARMMQRHYGVDPEALGFYHFEGIAK-LKVYKDEYREKLNNLELSDEQREHLLKEATDAFVFNHQVFADLGK
General information:
TITO was launched using:
RESULT:
Template:
1WZD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15746 for 1322 contacts (-11.9/contact) +
2D Compatibility (PS) -20196 + (NN) -12282 + (LL) 460
1D Compatibility (HY) -1600 + (ID) 1500
Total energy: -50864.0 ( -38.48 by residue)
QMean score : 0.332
(partial model without unconserved sides chains):
PDB file :
Tito_1WZD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WZD-query.scw
PDB file :
Tito_Scwrl_1WZD.pdb
: