Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLPAVTPGWPAIPPGATLGGFDGQGRRSWATISRAPSGASCSRNRSATRTYGWGATATTPATITGIPSTTAPAT
3WC3 Chain:A ((387-400))
-----------QILYGALVGGPDQNDQFEDLRSDYIRNEVANDYNAGFQGAVAALRAIQLRDG------------
General information:
TITO was launched using:
RESULT:
Template:
3WC3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -340 for 31 contacts (-11.0/contact) +
2D Compatibility (PS) -1628 + (NN) -3193 + (LL) 1068
1D Compatibility (HY) -400 + (ID) 300
Total energy: -4793.0 ( -154.61 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_3WC3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WC3-query.scw
PDB file :
Tito_Scwrl_3WC3.pdb
: