Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPDTLRHARVIILGSGPAGYSAAVYAARANLKPLLITG-----MQAGGQLTTTTEVDNWPGDPHGLTGPALMQRMQEHAERFETEIVFDHIHAVDLAGKPFTLRGDNGTYTCDALIVATGASARYLGLPSEQAFMGKGVSACATCDGF--FYRNREVAVIGGGNTAVEEALYLANIASRVTLVHRRETFRAEKILQDKLQARVAEGKIVLKLNAEVDEVLGDTMGVTGVRLKTRD---GGSEEIAVDGMFVAIGHTPNTSLFEGQLALK-DGYLVVNGGREGNATATNVPGVFAAGDVADHVYRQAITSAGAGCMAALDVERYLDSL |
2WHD Chain:A ((32-343)) | --------RVCIIGSGPAAHTAAIYAARAELKPVLFEGWMANDIAAGGQLTTTTDVENFPGFPTGIMGIDLMDNCRAQSVRFGTNILSETVTEVDFSARPFRVTSDSTTVLADTVVVATGAVARRLYFSGSDTYWNRGISACAVCDGAAPIFRNKPIAVIGGGDSAMEEGNFLTKYGSQVYIIHRRNTFRASKIMQARA---LSNPKIQVVWDSEVVEAYGGAGGGPLAGVKVKNLVTGEVSDLQVSGLFFAIGHEPATKFLNGQLELHADGYVATKPG----STHTSVEGVFAAGDVQDKKYRQAITAAGSGCMAALDAEHYLQEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218803 for 2615 contacts (-83.7/contact) +
2D Compatibility (PS) -32162 + (NN) -8261 + (LL) 824
1D Compatibility (HY) -26800 + (ID) 7250
Total energy: -292452.0 ( -111.84 by residue)
QMean score : 0.537
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