Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLILTRRVGETLMVGDDVTVTVLGVKGNQVRIGVNAPKEVAVHREEIYQRIQKEKDQEPNH
2MFE Chain:C ((1-52))
MLILTRKVGESINIGDDITITILGVSGQQVRIGINAPKDVAVHREEIYQRIQAGLTAPD--
General information:
TITO was launched using:
RESULT:
Template:
2MFE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18530 for 228 contacts (-81.3/contact) +
2D Compatibility (PS) -5771 + (NN) -723 + (LL) 168
1D Compatibility (HY) -7600 + (ID) 2000
Total energy: -34456.0 ( -151.12 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_2MFE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2MFE-query.scw
PDB file :
Tito_Scwrl_2MFE.pdb
: