Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSITSTDICQAADALKGFVGFNRKTGRYIVRFSEDSFGMDVADDSITPTSEFVWSSVRDDVMRLGREQLQILLEQNINERLNIGEPLLVYLRRQDLPEITAQRQLR
3QYY Chain:A ((68-98))
------VLVRLVESAYGWLG----AQDWIGRWGGDEFLIGVHASEDEATLKLNQWLSMLEREAPLHVSAGSAVCEVGIDATELYRRADAAMYRAKFSGGRRLVRD-
General information:
TITO was launched using:
RESULT:
Template:
3QYY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11887 for 140 contacts (-84.9/contact) +
2D Compatibility (PS) -3602 + (NN) -2664 + (LL) 820
1D Compatibility (HY) -3200 + (ID) 350
Total energy: -20883.0 ( -149.16 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_3QYY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QYY-query.scw
PDB file :
Tito_Scwrl_3QYY.pdb
: