Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRAVVELLAGARRLVIFTGAGVSAESGIPTFRDALGGLWARYDPAALATPAAFADDPALVWGWYEWRRLKVLGVQPNPAHRAIAALSGRIAN----TRLVTQNVDDLHERAGSRDVLHLHGSLHAPRCATC---AAAYRD----ALPDSVEPEEGRR-----IEP-PRCP--ACGGQVRPGVVWFGEALPEAALREAFAAACECDLLLSVGTSGVVQPAARIPGLALEHGASVVHVNPQPVRTRHPREHCLVGPAGEVLPELLRRAFPG
2NYR Chain:A ((14-270))-----KFFAKAKHIVIISGAGVSAESGVPTFRGA-GGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTE--------RFHFQGPCGTTLPEALA-----


General information:
TITO was launched using:
RESULT:

Template: 2NYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144420 for 1856 contacts (-77.8/contact) +
2D Compatibility (PS) -24995 + (NN) -13324 + (LL) 1656
1D Compatibility (HY) -17600 + (ID) 5350
Total energy: -204033.0 ( -109.93 by residue)
QMean score : 0.504

(partial model without unconserved sides chains):
PDB file : Tito_2NYR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NYR-query.scw
PDB file : Tito_Scwrl_2NYR.pdb: