Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARKNAVKDNLEQIQHQSYSELQELLSEANSMLADSAAFAGDKADSARARIGALLEKANDALGKGGSAVAERSRHAVDATESYIGANPWQTVAITTAVGLLAGFLLGRRS
3J27 Chain:B ((24-54))
-----------------------------------------------------------------------GAWKHAQRIETWILRHPGFTIMAA-ILAYTIGTTHFQRA
General information:
TITO was launched using:
RESULT:
Template:
3J27.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2801 for 131 contacts (-21.4/contact) +
2D Compatibility (PS) -3223 + (NN) 629 + (LL) 5064
1D Compatibility (HY) -400 + (ID) 250
Total energy: -981.0 ( -7.49 by residue)
QMean score : 0.133
(partial model without unconserved sides chains):
PDB file :
Tito_3J27.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J27-query.scw
PDB file :
Tito_Scwrl_3J27.pdb
: