Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVFSQVSMSHPINLCLAELDRAAIGRLWAPVDAFYMDHLEELIVLDLPGWRDSAGIRREMEFFEA------GGQRVSLWSEVEHEFR
3QUA Chain:A ((113-155))
----------------------------------------------------------------------EMEHRSDAFIAL--PG---GIGTLEEFFEAWTAGYLGMHDKPLILLDPFGHYDG
General information:
TITO was launched using:
RESULT:
Template:
3QUA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11577 for 164 contacts (-70.6/contact) +
2D Compatibility (PS) -4338 + (NN) -2000 + (LL) 6708
1D Compatibility (HY) -400 + (ID) 350
Total energy: -11957.0 ( -72.91 by residue)
QMean score : 0.415
(partial model without unconserved sides chains):
PDB file :
Tito_3QUA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QUA-query.scw
PDB file :
Tito_Scwrl_3QUA.pdb
: