Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLAQFTPSALADLANCVLRIPLALQQPSSVAMTLPSLTSFMPHFGAPALLLLQLLAALPATAAETDATPLRFSVMESWSMPLVRLQRGQPIDGIVYDITRSLARQV---GRKALYHPYPRGRIEQAMNAGEIDVRCYISPAWLSHDFPGYRWSVALLVQRDILVAREGFA-PIPEALPAQRIGTVLGYSYPR-LQALFDIGRLRRDDARTQDLVLEKLRAGRYRYAVSHQLSLHWSNRQAPGQPPLQEAAQLEETAVSCMVRDSAEVPVEAILKTFEEMKRSGEIEEILQRYR |
| 2YJP Chain:A ((51-275)) | ---------------------------------------------------------------IKEKGVIRIGVF-GDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLIL-ANFTQTPERAEAVDFADPYMKVALGVVSPKNKPITDMAQLKDQTLLVNKGTTADAFFTKSHP--EVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWAKENPNFEVAI-GNLGPAEFIAPAVQKGNADLLNWVNGEIAAMKKDGRLKAAYEKTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YJP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124785 for 1809 contacts (-69.0/contact) +
2D Compatibility (PS) -23268 + (NN) -6745 + (LL) 5892
1D Compatibility (HY) 400 + (ID) 1150
Total energy: -149656.0 ( -82.73 by residue)
QMean score : 0.413
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