Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFLLIGLSEHRPLPLGQGSPLRWLALLFGLLAWHAGAGERVIYPRHSEGRNPEPYVVELLQLALAR-SGGDYRLEPSAQPMPQSRAQLRLEQDDPGLQVMWA-QS-RDDLEETLLPIRIPIYRGLIGWRIPLVSAANKDILASARTLDDLRRLRFGQRQDWADTPILRANG---LEVKTSQNYESLFRMLDAGRFEVFPREVVVIDGELEDASRAGLHLAIDQHLALHYPAAFYFFVSRQRPELAEAIRQGLEKAIADGSFERLFERHFKTRLEKLALRQRRIIELKNPYLPGKTPFQREALWYRP |
| 2Q88 Chain:A ((21-249)) | -------------------------------------NEPPFTA--VGADGKVSGAAPDVAREIFKRLGV---ADVVAS-ISEYGAMIPGLQAG--RHDAITAGLFMKPERCAAVAYS-QPILCDAE---AFALKKGNPLGLKSYKDIADNPDAKIGAPGGGTEEKLALEAGVPRDRVIVVPDGQSGLKMLQDGRIDVYSLPVLSINDLVSKAND--PNVEVLAPVEGAPVYCDGAAFRKGDEALRDAFDVELAKLKESGEFAKIIEPYGFSAKAAMSTTREKLCAAK------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92523 for 1837 contacts (-50.4/contact) +
2D Compatibility (PS) -23708 + (NN) -1338 + (LL) 3576
1D Compatibility (HY) 2400 + (ID) 1400
Total energy: -112993.0 ( -61.51 by residue)
QMean score : 0.386
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