Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----MLAELFAVMAPVLFGAGVGYVWVRLGHAYPTEFVSRIVFNIGSPCLILATLAHTRV---------DLHSFGRMALASALICVCMAALGWAAARLGRQEWQVLV----PAYSFP-NVGNMGLPVCLYAFGEAGM----TLAVAFYLIMSIGNFSLG---VFWMSG-----------------------ERSWRSLLGNPILLSVLLALLLMGLDLQLPRWM---------ANTVDLMAGLTIPLMLI--TLGVSLASIRPR-QLG-----------NGFFYGGLRLLLGA------LVGWSVALALQLPPLAQGVLVVQSSMPVAV------------------------FNYLYALRGNRSPDQVASLVLCSTLLSFAFIPLLLTWWLPALR----- |
4R6H Chain:A ((28-421)) | ADTAKKTLTIYSTMST----DSERDTFRKLAAAFEKEH-SDIHVSLHFPGNDYENMMRVRMAANDLPDLFDTHGWGKIRYGEYT--ADLRDMKWTQD-LDPNLNSILKNKSGKVYAYPINQAKDGLAYNRNILDRYGIAPPETMDDFIKALRTIKEKSKGSIVPFWFAGYDKSSFAQYYDQFATPLLITDPAHNEKKQLINGTFQWSKFTYLSEILKQMQKEKLINIDAVTAKKSQLIELMAQNKIAFTMQGGTLGQDVAQINPNVKVGIIPTPAIHPGDDPIWIGGERYTLAAWKDSPQLKEAKDFIAFMARPANAKQMAEATSLPSGLTNVKADIFYANDYEYYQDVKVEPYFDRLYLPNGMWDVLGTVGQELAADILAPQDISQKLGREYKRLREQSET |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -271058 for 2019 contacts (-134.3/contact) +
2D Compatibility (PS) -29199 + (NN) 373 + (LL) 880
1D Compatibility (HY) -4000 + (ID) 3100
Total energy: -306104.0 ( -151.61 by residue)
QMean score : 0.188
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