Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQQVAKRAMTDTPDD-------RTGEASGLSKRQAFHRQHRQRAEEEARRLLDARAEQGGRWLDWVAGQLYLLR--PP------------EYAAMVRRELQRLSGD |
| 2JPF Chain:A ((1-106)) | KQQLQEHAPSHANLDVKWLDGLRAGSMALQGDVKVWMQNLEDLHTRRPDEFTARLQQSTDALYSHLEAQWAKQHGTPPTASDVVGMPQWQEYTAMLRERFAGLDTI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JPF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15385 for 449 contacts (34.3/contact) +
2D Compatibility (PS) -8917 + (NN) -3334 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 750
Total energy: 784.0 ( 1.75 by residue)
QMean score : 0.337
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