Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLKGKTALVTGSTSGIGLGIALSLAEAGADLLLNGFGEVDAALAQVRA-----RGVRAEHHPADLSSPEQIGELMAFAERTFGGVDILVNNAGIQYVAPVQEFPTERWDAIIAINLSSVFHTTRLALPGMLARGWGRIVNIASTHGLVASAGKSAYVAAKHGVLGLTKSVALETARTPVTCNAICPGWVLTPLVQKQIDARTAEGVSPEQAEHDLLAEKQPSLAFVTPEQLGGLTLFLCSEAADQVRGAAWNMDGGWVAQ
2ZTU Chain:A ((2-260))
--LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDA-AEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVR------------------------LLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWTAR
General information:
TITO was launched using:
RESULT:
Template:
2ZTU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146923 for 1977 contacts (-74.3/contact) +
2D Compatibility (PS) -24500 + (NN) -7041 + (LL) 1732
1D Compatibility (HY) -20800 + (ID) 7300
Total energy: -204832.0 ( -103.61 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_2ZTU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZTU-query.scw
PDB file :
Tito_Scwrl_2ZTU.pdb
: