Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFLLIGLI---RFYQYAISPLIGPRCRFYP-SCSHYTLEAIRVHGALR---GGYLGARRLLRCH-------PWHPGGYDPVPERQEQACACHRTAKPGK
1DXY Chain:? ((1-100))
MKIIAYGARVDEIQYFKQWAKDTGNTLEYHTEFLDENTVEWAKGFDGINSLQTTPYAAGVFEKMHAYGIKFLTIRNVGTDNIDMTAMKQYGIRLSNVPAY
General information:
TITO was launched using:
RESULT:
Template:
1DXY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37077 for 549 contacts (-67.5/contact) +
2D Compatibility (PS) -9617 + (NN) -3520 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -52414.0 ( -95.47 by residue)
QMean score : 0.173
(partial model without unconserved sides chains):
PDB file :
Tito_1DXY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DXY-query.scw
PDB file :
Tito_Scwrl_1DXY.pdb
: