Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNILISGAASGIGAASARLFHRRGWRVGLLDIDAEALRGLAAQLPGAWHRAV----DVSEPDAVGEALAQFC-ADGRLRLLFNCAGVLRFGRFEEVALEDHA---RLLAINLHGVLNCCHAAFPFLRATPQAQVLNMGSASGLYGVPEMAVYSASKFAVRGLTEALELEWRRHGIRVADLMPPFVRTPMVAG-------QAYQPPVLRRLGLRLDAEDIAE-AAWRHAHSRRVHRPVGGLFTALYWAGQLSPPWVNRAVMAWLSRG |
| 4URF Chain:A ((6-225)) | -KTALVTGAGNGIGRTIALTYAAEGANVVVSDISDEWGRETLALIEGKGGKAVFQHADTAHPEDHDELIAAAKRAFGRLDIACNNAGI--SGEFTPTAETTDAQWQRVIGINLSGVFYGVRAQIRAMLETGGGAIVNISSIAGQIGIEGITPYTAAKHGVVGLTKTVAWEYGSKGIRINSVGPAFINTTLVQNVPLETRRQLEQMHALRRLG---ETEEVANLVAWLSSDKASFVTGSYYAVDGGYLAR------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4URF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135727 for 1706 contacts (-79.6/contact) +
2D Compatibility (PS) -21461 + (NN) -7198 + (LL) 1988
1D Compatibility (HY) -9200 + (ID) 3500
Total energy: -175098.0 ( -102.64 by residue)
QMean score : 0.484
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