Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVVLYKRLSAPLMERLRERVEVLLVEEPGRDGLARLRDA------LPEAHGLLGASLRLDAGLLDLAPRLEAIASVSVGVDNYDIDYLDRRGILLSNTPDVLTETTADTGFALILATARRVVELAGWVRAGE---WKKSVGAAQFGTDVHGKTLGIVGMGRIGEALARRGHHGFGMRVLYHSHSP-KPHVEERYAASYRPLDALLEESDFVCLTLPLTAATEGLIGAAQFARMRPQAIFINISRGRVVDEAALIEALAQRRIRAAGLDVFERE-------PLSPDSPLLRLPNVVATPHIGSATEETREAMARCAVDNLLAALAGARPLNLVNPSAWARRRGA |
| 4E5M Chain:A ((17-326)) | --------QLLAPHCELITNQTDSTLTRE---EILRRCRDAQAMMAFMPD---------RVDADFLQACPELRVIGCALKGFDNFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGQFRGWQPRF----YGTGLDNATVGFLGMGAIGLAMADR-LQGWGATLQYHARKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAVRAVRLEIERCAAQNILQALAGERPINAVN---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4E5M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -153940 for 2260 contacts (-68.1/contact) +
2D Compatibility (PS) -31943 + (NN) -15259 + (LL) 1940
1D Compatibility (HY) -21200 + (ID) 5850
Total energy: -226252.0 ( -100.11 by residue)
QMean score : 0.471
|
|
|