Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSMTPIARAVAFAALGSSITVPTLAHAEFIKDSKASIELRNFYFNRDFRQEGASQSKAEEWAQGFLLRYESGYTEGTIGFGVDAIGLLGVKLDSSPDRSGTGLLKRDRETGRAQDDYGEAGITAKLRASKSTLKIGTLTPKLPVIMPNDSRLLPQTFQGGALNSMEIDGLTLDAGRLKKVNQRDSSDNEDMTITGGGKRNIVVRSGLTSDKFDFAGGSYKWT-DNLSTSYHYGKLDNFYKQHYLGLVHTLPIADKQSLKSDIRWARSTDDGSS---NVDNKALNAMFTYSLGYHAFGVGYQKMSGDTGFAYINGADPY-LVNFIQIGDFANKDEKSWQARYDYNFAGVGIPGLTFMTRYVKGDNIDLLTTSGEGKEWERDMDIAYVFQSGPLKNLGVKWRNATMRTNYTNDYDENRLIVSYTLPLW |
| 2QTK Chain:A ((4-388)) | ---------------------------GFLEDAKTDLVLRNYYFNRDF------KSLVDEWAQGFILKFSSGYTPGTVGVGLDAIGLFGVKLN------NSELLPL-H----AADNYGRVGVAAKLRVSASELKIGEMLPDIPLLRYDDGRLLPQTFRGFAVVSRELPGLALQAGRFDAVSLRNSADMQDLSAWSAPTQK--------SDGFNYAGAEYRFNRERTQLGLWHGQLEDVYRQSYANLLHKQRVGD-WTLGANLGLFVDRDDGAARAGEIDSHTVYGLFSAGIGLHTFYLGLQKVGGDSGWQSVYGSSGRSMGNDMFNGNFTNADERSWQVRYDYDFVGLGWPGLIGMVRYGHGSNATTKAGSG-GKEWERDVELGYTVQSGPLARLNVRLNHASNRRSFNSDFDQTRLVVSYPL--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QTK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 32898 for 2870 contacts (11.5/contact) +
2D Compatibility (PS) -37324 + (NN) -1972 + (LL) 3616
1D Compatibility (HY) -31200 + (ID) 8000
Total energy: -41982.0 ( -14.63 by residue)
QMean score : 0.176
|
|
|