Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRRHSCKGVGSSVAWSLLGLAISAQSLAGTVTTDGADIVIKTKGGLEVATTDKEFSFKLGGRLQADYGRFDGYYTNNGNTADAAYFRRAYLEFGGTAYRDWKYQINYDLSRNVGNDSAGYFDEASVTYTGFNPVNLKFGRFYTDFGLEKATSSKWVTALERNLTYDIADWVNDNVGTGIQASSVVGGMAFLSGSVFSENNNDTDGDSVKRYNLRGVFAPLHEPGNVVHLGLQYAYRDLEDSAVDTRIRPRMGMRGVSTNGGNDAGSNGNRGLFGGSSAVEGLWKDDSVWGLEGAWALGAFSAQAEYLRRTVKAERD------------------REDLKASGYYAQLAYTLTGEPRLYKLDGAKFDTIKPENKEIGAWELFYRYDSIKVEDDNIVVDSATREVGDAKGKTHTLGVNWYAN----EAVKVSANYVKAKTDKISNANGDDSGDGLVMRLQYVF |
| 2Y0H Chain:A ((243-388)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDNRNLNAMLTLRAGAHAFGIGVQKMIGNDAFPVLNGYTTPYVANLMAYQTFTRPQEKSWQLRYDYDFAGL-------------------GLPGLNLMTRYVQGRDIDRGA-------GRADDSEWERNTDLSYVIQSGPLKSVALKWRNITYRSRYG------ADLDENRFIVNYTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y0H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 30885 for 781 contacts (39.5/contact) +
2D Compatibility (PS) -12546 + (NN) 3563 + (LL) 13012
1D Compatibility (HY) -1200 + (ID) 650
Total energy: 33064.0 ( 42.34 by residue)
QMean score : 0.145
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