Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNDMEDHLLTVLSVASGVPKEEISRD-SRMEDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDELFQLVEKHRAA
2FAC Chain:A ((3-77))
----IEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA-
General information:
TITO was launched using:
RESULT:
Template:
2FAC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34706 for 487 contacts (-71.3/contact) +
2D Compatibility (PS) -7816 + (NN) -4671 + (LL) 56
1D Compatibility (HY) -3200 + (ID) 1150
Total energy: -51487.0 ( -105.72 by residue)
QMean score : 0.701
(partial model without unconserved sides chains):
PDB file :
Tito_2FAC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FAC-query.scw
PDB file :
Tito_Scwrl_2FAC.pdb
: