Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTAKPEIVITYCTQCQWLLRAAWLAQELLSTFADDLGKVCLEPGTGGVFRITCDGVQVWERKADGGFPEAKALKQRVRDRIDPQRDLGHNDRPSR
2P0G Chain:A ((3-80))
----KAQIEIYYCRQCNWMLRSAWLSQELLHTFSEEIEYVALHPDTGGRFEIFCNGVQIWERKQEGGFPEAKVLKQRVRDLI--------------
General information:
TITO was launched using:
RESULT:
Template:
2P0G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7594 for 533 contacts (-14.2/contact) +
2D Compatibility (PS) -8926 + (NN) -10613 + (LL) 220
1D Compatibility (HY) 800 + (ID) 650
Total energy: -26763.0 ( -50.21 by residue)
QMean score : 0.256
(partial model without unconserved sides chains):
PDB file :
Tito_2P0G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P0G-query.scw
PDB file :
Tito_Scwrl_2P0G.pdb
: