Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MEEAGFGPGRSNMHTGETLAAAPPARPLRQSRLGGLSLFLALAGVAIALAVMALALGERIDLSDENHLLGLFAALLAVFAVSTCGLVLGLAGLLRRSRKRHLALAGIVLNLSCLLWGWHALSTAAAAILMVLGQTGLSFLSALAVLFGMIFFRQA
2Q97 Chain:T ((1-109))
MQQELGLLRPEERLIAGQAKAAALQTVH----QLGAVAL------------------------TPEQAKAALLDEILR----ATQNLDLRKYENLNTEQQKAYEQVQRDLS---------QLSPETKALLIENQRKEKTLLEKARKLFQR------
General information:
TITO was launched using:
RESULT:
Template:
2Q97.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5707 for 424 contacts (-13.5/contact) +
2D Compatibility (PS) -11730 + (NN) -6020 + (LL) 5580
1D Compatibility (HY) -2000 + (ID) 1200
Total energy: -21077.0 ( -49.71 by residue)
QMean score : -0.097
(partial model without unconserved sides chains):
PDB file :
Tito_2Q97.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q97-query.scw
PDB file :
Tito_Scwrl_2Q97.pdb
: