Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPVLPEQAQEALDAFGHTASWEQRARLLLQWGERLAPLAEHERQEEHRVHGCESLVWLLGEQRDGHWRFRADSDA-RLIRGLLAVLLARVDGIETRELARLDLNDWFTCLGLSRQLSPSRSNGLNAVLQRMRELAGQTAG
3VV3 Chain:A ((263-299))
------------------------------------------------------------------YATYSGTSMATPHVAGAAALVLSVNPDLTTLELKELL--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3VV3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9937 for 147 contacts (-67.6/contact) +
2D Compatibility (PS) -3992 + (NN) -3591 + (LL) 7348
1D Compatibility (HY) -1200 + (ID) 450
Total energy: -11822.0 ( -80.42 by residue)
QMean score : 0.413
(partial model without unconserved sides chains):
PDB file :
Tito_3VV3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3VV3-query.scw
PDB file :
Tito_Scwrl_3VV3.pdb
: