Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKYIALPAVSLLALALAACSTPPNANLEQARSNFSALQSQPDATKVAALETKDAGDWLAKADKAYQDGEDQRDVDQLAYLTNQRIELAKQTIVLRNAEAQLQNASAQRAQARLDARTAQLDKLRSQLNAKQTSRGTMVTFGDVLFDLDKSDLKPGAMRNIQQLAEFLQQNPERQVIVEGYTDSTGSANYNQRLSERRADSVRMALLSRGISPERVATRGYGKEYPVASNGTSSGRAMNRRVEVTISNDAKPVAPRSSVSG |
| 4G4V Chain:A ((11-111)) | -----------------------------------------------------------------------------------------------------------------------------------------------VHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDERGTREYNMALGERRAKAVQNYLITSGVNPQQLEAVSYGKEAPVNPGHDESAWKENRRVEI----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G4V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12719 for 739 contacts (-17.2/contact) +
2D Compatibility (PS) -11141 + (NN) -7455 + (LL) 11600
1D Compatibility (HY) -5600 + (ID) 2000
Total energy: -27315.0 ( -36.96 by residue)
QMean score : 0.570
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