Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLSLYLLTVLIWGTTWIAI-KLQMGPVAITLSIAYRFALAALVLFAVLLLGRRLQRLDARGQRLCMAQGVCLFCLNFICFYTASQWIP----SGLVAVVFSTAT----LWNALNARLWFGQRIASNVMAGGGLGLLGLGLLFWPELVGHQATPETF-YGLGLALLG------TLCFSTG-NMLSSLQQKAGIRPLTGNAWSMLYG---TLILLALCLFQGVP---LSFDWSARYV----------GSLLY-LAIPGSVIGFTAYLTLVGRMGPDRA-AYCTVLFPVVALNISAFAEGYRWTAPALAGLVLVMLGNVLVFRKPKAPALAGPARST |
| 4PE6 Chain:A ((18-339)) | --KPFIALSNGFIGNGWRQTMIAKFEEAAKQAQADGLIGKYKVVNAP----GNNSATEQVAQIKSLLLQKPDALLINPASPTALQPVIQQACDAGVKVVVFDSAIDAPCAYILQNSFVDWATYAAKPVLESIG----GKGNVIVVRGVVG-SQPEAEMYETTKKILAEYPQVKTVATVTGMCDGATAQKAVLGVLPSVSTVDAVIGCGDGYGVAQAFATAGKPIPAVTFETNGRALSYWKDNKIDNGSVAVMSDPAQSVAALWAALDLLEGRDLPKQMTFPIVLIE--EKDRDTWASVLKPDEYAAWPWTRELFRQQVEAIKTGGEPVQPPIPST |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PE6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235177 for 2301 contacts (-102.2/contact) +
2D Compatibility (PS) -29556 + (NN) -1480 + (LL) 1708
1D Compatibility (HY) 15600 + (ID) 1000
Total energy: -249905.0 ( -108.61 by residue)
QMean score : 0.143
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