Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLSRRIPAALSPFQNRVIGACLLGGLLAAGAPAQAEEATGNARWVSDSLTTFVRSGPTDGYRIVGTLTSGQKVELLGTQGNYSQVRGENGSTVWIPSRDLQEVPGQAERLPQLEQKVAALTAELDGINDTWKTRVQG--MQETLDTRK-KL--IDELQAARSNLDAELGKARSDLRAVQAQLGDENKQVLMRYMVYGGSIAGAGLFAGLILPSLLRVRRKRNDKWF |
| 2PMS Chain:C ((5-92)) | ---------------------------------------------------------------------------------------------------DAEEVAPQA-KIAELENQVHRLEQELKEIDE--------APLQSKLDAKKAKLSKLEELSDKIDELDAEIAKLEDQLKAAE----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PMS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5436 for 301 contacts (18.1/contact) +
2D Compatibility (PS) -7488 + (NN) -5756 + (LL) 8968
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -5390.0 ( -17.91 by residue)
QMean score : 0.645
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