Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGI--RVVE-------AAGLLAEVTR-RGGRVRHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRV-LRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVAERNRLYVDSQGGL----------AYF--YPIGFDRARLVVSFPREEARELMADTRGESLRRRLQRFVGDE----SAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPVNQAIVSYGHALATSLEDRQRFAGVFDTALQGSSRTPEALGGERSYQPVRSPAPLG |
| 4K2X Chain:A ((24-382)) | ------DVVIAGAGPTGLMLACELRLAGARTLVLE-----RLAEPVDFSKALGVHARTVELLDMRGLGEGFQAEAPKLRGGNF---------ASLGVPLDFSSFDTRHPYALFVPQVRTEELLTGRALELGAELRRGHAVTALEQDADGVTVSVTGPEGPYEVECAYLVGCDGGGSTVRK-LLGIDF---PGQDPHMFAVIADA-----RFREELPHG---PYGVMRHDLRAWFAAFPLEPDVYRATVAFFD-------APVTEEDVRAALTEVAGSDFGMHDVRWLSRLTDTSR---------QAERYRDGRVLLAGDACHIHLPAGGQGLNLGFQDAVNLGWKLGATIA-GTAPPELLDTYEAERRPIAAGVLRNTRAQAVLIDPDPRYEGL------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178945 for 2566 contacts (-69.7/contact) +
2D Compatibility (PS) -33595 + (NN) -6190 + (LL) 4336
1D Compatibility (HY) -10800 + (ID) 5050
Total energy: -230244.0 ( -89.73 by residue)
QMean score : 0.349
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