Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSALQPSRSYRITGYSPAISNGYRQRLFSMGLLPGAALRVVRIAPLGDPIQVETRQTSLALRRKDLALLTLVPLD
2K4Y Chain:A ((7-78))
LNEVEIKSKVKVIGIVP--ESKVRRKIMDMGIVRGTEIYIEGKAPMGDPIALRLRGYSLSLRKSEAKDILVEVL-
General information:
TITO was launched using:
RESULT:
Template:
2K4Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48071 for 478 contacts (-100.6/contact) +
2D Compatibility (PS) -7828 + (NN) -3777 + (LL) 272
1D Compatibility (HY) -6400 + (ID) 900
Total energy: -66704.0 ( -139.55 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_2K4Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K4Y-query.scw
PDB file :
Tito_Scwrl_2K4Y.pdb
: