Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRFVNTLPLIFGLTAALGSSMALALPSDREQPIRVQADSA---ELDDKQGVAVYRGDVVVTQGSTKLTGNTVTLKQDKNGDIEVVTSVGKPAYYEQKPAPDKDVTKAYGLTIQYFVTQNRVVLIDQAKVIQEGNTFEGEKIVYDTQRQIVNAGRATGSQVTSPRP---------------RIDMVIQPKKKAQ |
1GO3 Chain:E ((1-184)) | MYKILEIADVVKVPPEE-------FGKDLKETVKKILMEKYEGRLDKDVGFVLSIVDVKDIGEGKVVHGDGS-----AYHPVVFETLVYIPEMYELIEGEVVDVVE-FGSFVRL---GPLDGLIHVSQIMDDYVSYDPKAIIGKETGKVLEIGDYVRARIVAISLKASKIALTMRQPYLGKLEWIEEEKAKKQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GO3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4328 for 1025 contacts (-4.2/contact) +
2D Compatibility (PS) -16180 + (NN) 4588 + (LL) 1300
1D Compatibility (HY) -8400 + (ID) 1150
Total energy: -24170.0 ( -23.58 by residue)
QMean score : 0.213
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