Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLLDIKNLSVRFGDTTAVPVVDGLDLSVDKGEVLAIVGESGSGKSVTMMALMGLIDAPGWVSADHLRFDGHDMLTLKGRQRRRIVGKDMAMVFQDPMTALNPSYTVGYQIEEVLRLHLGLRGKALRQ--RALELLERVEIPAAASRLDAYPHQLSGGMSQRVAIAMAIAAEPKLLIADEPTTALDVTIQAQIMELLLNLQRDQDMALILITHDLAVVAETAQRVCVMYAGEAVEIGGVPALFDRPTHPYTEALIKAIPEHCAGEARLATLPGIVPGRYDRPRGCLLSPRCPYAQEHCRQERPALETHERGAVRCFYPLNLLNEVA |
| 1VCI Chain:A ((10-253)) | MVEVKLENLTKRFGNFTAV---NKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGL-EEP---TEGRIYFGDRDVTYLPPKDR------NISMVFQ--------HMTVYENIAFPL--KKFPKDEIDKRVRWAAELLQIEEL------LNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNSVFVATFIGA-PE------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1VCI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -189455 for 1843 contacts (-102.8/contact) +
2D Compatibility (PS) -24677 + (NN) -9994 + (LL) 5880
1D Compatibility (HY) -13200 + (ID) 4050
Total energy: -235496.0 ( -127.78 by residue)
QMean score : 0.486
|
|
|