Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRRLPFLLRCALFCGAGLLAATAQARMESLDDDQLSDVVGQAFINLTTDAANGLNFTRINFGADIETQLNMKKLQLGQYNRSGELAGSADIAIDNFALGTVNDTTGAINPFLISNPYIEFAYDGSKMV-----GIRIGFGEAKGYLSGDIKTLTGNVPVDLYGTGSQLGGSISCGLLALDCLAAKTAITLTGSSQYT-AQAELVNSSGNPDPIRAAMIGLKNGTAL----------DMHDSTIIGSLVNVLLPFLTSNDCKLMGAQTCFNLAQY--------QSFPIGTVDPNNAQNFIDSSKGFFISMQSQNVQWRDQQDPSKLVAALAGAFLNMSRNADGTAPIKVDFGQAFNGIPRQDTCLGGLNKGC |
| 1JBK Chain:A ((1-195)) | -----------------------------------------------------------------------------------------------------------------HMQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPG--VGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILR-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46792 for 1175 contacts (-39.8/contact) +
2D Compatibility (PS) -17018 + (NN) -27 + (LL) 10420
1D Compatibility (HY) -2400 + (ID) 1600
Total energy: -57417.0 ( -48.87 by residue)
QMean score : 0.184
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