Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLRVANQQLAQYATVPARLERIEFNPFSLELTLWGLRLGEEKNPQLAFRRLYANLQLDSLWKRQLHLADVELEGPHTELLFGEKGQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLRPSEPVDFSFDPLGFELHNLSTLPDDGAKMTLVATGPNGGRLDWEGDLTLVPITSRGHLSVKDIQLKAWWPYVRDNAPLVLENGVVSLSSDYRLDLSKDTQLLLDKAALKLADFSINSPQGKPLAKLASLDVAATTLDLAKQEVVLGEVRSQGLEAWAAREKDGQLDWQKLFADFTPPPRKAPAPKPAENTDPAAAPTDAAKTTSEPATDGAAKAAAIASGEASKDRPAEKDASVAETERATDDKESAKAAEGAADKVAKQETSKAPKTGKATGQETAKTAEIDKAASDSPQQLADTAKTPPPESTKASAETPAKPWNIVLRDAQLRGYKAHLVDRQPATEVPLEVGPLDLDLQNVDSLGKTPFDLKLKTGLGNRGQVQASGQVVLDPVSARLKVSTRDIDLRVAQAYISPFIRLELRSGFLGSELAVDLKSVEPLAFSVDGSAEVSQLHTLDTIKDRDFVKWTKLTLNGLAYRHEDSLSIQSVSFEEPYARFIINEDRSTNVSELIIPQPASSSGKTAAESKNAPASKPLGIHIGGVRINNGSANFADLTLMPPFGTAIQQLSGEVGTLDTRNSQPAKVDIKGKVDKYAPVTIAGELDPFDPLKKLDITTSFKRVELTTLTPYSGKFAGYRIRKGRLNLDLHYQIERSQLKAENKVLLEGLQLGEKVDSPDAVDLPVKLAVALLKDTKGNIDIQLPVAGDLNNPEFSVMPIVWQTLRNLVLRAVQAPFKFIAGLAAGGNEDLGTVPFAAGSDELTPEAQANLDKLADALKERPALRLEVEGVASAAADGPSIGAKRLELEYQNTYYRMLQRRGDKVPSDAKQLEVPENMQAPLLEGIYRTRLKQQPPAEWKELDSDERTAKMREAVIASWAKSQVLLRQIGQARATRIKDYLVEKGQLPDDRIYLIDVSFAEGEDKGNVDTQLHLDSE |
2PGA Chain:A ((9-135)) | -----------------------------LGLTKNDLQGAQLAIVPGDPERVE-----------KIAALMDKPVKLASHREFTSWRAE-LDGKAVIVCSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQPHINVGDVLVTTASVRLDGASLHFAPMEFPAVADFA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6608 for 854 contacts (-7.7/contact) +
2D Compatibility (PS) -12345 + (NN) 341 + (LL) 58348
1D Compatibility (HY) -6400 + (ID) 1600
Total energy: 31736.0 ( 37.16 by residue)
QMean score : -0.011
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