Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPEGFNGAVLDWYDRHGRKDLPWQQGITPYRVWVSEIMLQQTQVSTVLGYFDRFMAALPDVEALAAAAEDEVLHLWTGLGYYSRARNLHKTAQIVVERHAGEFPRDVEQLAELPGIGRSTAGAIASLSMGLRAPILDGNVKRVLARYLAQDGYPGEPKVARALWEAAERFTPHARVNHYTQAMMDLGATLCTRSKPSCLLCPLVSGCRAHLLGREADYPQPKPRKALPQKRTLMPILANRDGAILLYRRPSSGLWGGLWSLP--ELDDLDGLEPLAARHSLALGERRELS----GLTHTFSHF--QLAIEPWLVAVEGAPRAVAEGDWLWYNLATPPRLGLAAPVKKLLKRAEQELGRGTAA |
| 1RRS Chain:A ((16-321)) | -----FQRDLLDWFARE-RRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYYSRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVNGNVMRVLSRLFLVTDDIAKPSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKMK---VKQVPLAVAVLADDEGRVLIRKRDSTGLLANLWEFPSCETDGADGKEKLEQMV----GLQVELTEPIVSFEHAFSHLVWQLTVFP--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RRS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153340 for 2189 contacts (-70.1/contact) +
2D Compatibility (PS) -30818 + (NN) -16325 + (LL) 4488
1D Compatibility (HY) -24800 + (ID) 5900
Total energy: -226695.0 ( -103.56 by residue)
QMean score : 0.452
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