Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATPAYMSITGTKQGLITAGAFTEDSVGNTYQEGHEDQVMVQGFNHEVIIPRDPQSGQPTGQRVHKPVVITKVFDKASPLLLAALTSGERLTKVEIQWYRTSAAGTQEHYYTTVLEDAIIVDIKDYMHNCQDPGNAHFTHLEDVHFTYRKITWTHEVSGTS--GSDDWRSPVAG
3WX6 Chain:A ((7-168))
------LKVKGKTQGEIK----------------------ILAFKNDYDMPARLQEGLTPAAAARGTITLTKEMDRSSPQFLQALGKREMMEEFEITI-----------LFTYKFEKVLITHMDQYSP-------------------IEEIKFTYSGYSLEIAGAANWTN----
General information:
TITO was launched using:
RESULT:
Template:
3WX6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34684 for 757 contacts (-45.8/contact) +
2D Compatibility (PS) -12012 + (NN) -6014 + (LL) 2872
1D Compatibility (HY) -7200 + (ID) 1400
Total energy: -58438.0 ( -77.20 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_3WX6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WX6-query.scw
PDB file :
Tito_Scwrl_3WX6.pdb
: