Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQTNLCDSARQRAEAAEAERILRSCVHCGFCNATCPTYQELGDELDGP-------RGRIYLIKQFLERDEASERTRLHLDRCLSCRNCETTCPSGVEYHKLLDIGRDLLAERLPRGFRQRLLRDGLRLLAPRPGLFGALAGAAGRLRPLLPEAMQGKLPRRVAAPGRRPQPRHARRVLLLEGCVQPALSPNTNAAAARVLDRLGISVTPAAAAGCCGALDFHLDAQERGRQRARRNIDAWWPLLREGAEAIVQTASGCGAFVKDYAYLLRDDPRYADKAREVAAAARDLVEVLRDEPLESLGLRCDQRLAFHCPCTLQHAQRLGGAVEAVLRRLGFHLTEVADGHLCCGSAGTYSLTQPALSQRLRDNRLDALESGAPDVIVTANVGCQAHLDGAGRTPVRHWIELLDQALPGGE |
3AEC Chain:B ((144-243)) | ----------QSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTGTCPKGLNPGKAIAEIKKMMA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3AEC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -21274 for 588 contacts (-36.2/contact) +
2D Compatibility (PS) -9572 + (NN) -2428 + (LL) 20268
1D Compatibility (HY) -4400 + (ID) 1500
Total energy: -18906.0 ( -32.15 by residue)
QMean score : 0.344
|
|
|