Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRLQPVRLVSFVTTDLAGITRGRSLPLATLEEQLASGCGWVPANSSLTPQDLIDESSPWGSHGDLRLLPDPNSRVRVEQGPDAAAPALD---YLHGNLVETDGTPWPACPRSLLRAEVERYRDSGLQVIAAF--EHEFSLLGLPG--ERPAAAF------------------------SLQAQRAAGQFP-----------GWLVSALAQAGTEPEMFLPEYGQR------QYEVTCRPAQGVAAADRAVNVREVTREVARQMGLRTCFAPLPAPGAVTNGVHLHLSLQHADGSPLLYEPGRPNDLSELGEHWAAGVLAHLPALCALTAPTAASYLRLKPHHWSAAYACLGLRNREAALRICPVVSVGGKPLGKQYNLEFRPMDATTCPHLAMAAVLIAGRLGIERRLPLRALADVDPHGLSDEERQARGIQALPATLGDALDCLQRDEALCAE---LPKPLLDTYLAMKRHELALTAGLSDDDLCRHYAELY |
| 4XYC Chain:A ((16-456)) | ----EKVEYVDVRFCDLPGIMQHFTIPASAFDKSVFDD-GLAFDG---------HES-------DMLLLPDPET-ARID--PFRAAKTLNINFFVHDPFTLE---PYSRDPRNIARKAENYLISTGIADTAYFGAEAEFYIFDSVSFDSRANGSFYEVDAISGWWNTGAATEADGSPNRGYKVRHKGGYFPVAPNDQYVDLRDKMLTNLINSG-----FILEKGHHEVGSGGQAEINYQFNSLLHAADDMQLYKYIIKNTAWQNGKTVTFMPKPLFGDNGSGMHCHQSLW-KDGAPLMYDETGYAGLSDTARHYIGGLLHHAPSLLAFTNPTVNSYKRLVPGYEAPINLVYSQRNRSACVRI-PI--TGSNPKAKR--LEFRSPDSSGNPYLAFSAMLMAGLDGIKNKIEPQAPVDKDLYELPPEE--AASIPQTPTQLSDVIDRLEADHEYLTEGGVFTNDLIETWISFKR---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XYC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177149 for 2995 contacts (-59.1/contact) +
2D Compatibility (PS) -40071 + (NN) -18247 + (LL) 2824
1D Compatibility (HY) -17600 + (ID) 6200
Total energy: -256443.0 ( -85.62 by residue)
QMean score : 0.474
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