Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRTPHLLAIQSHVVFGHAGNAAAVFPMQRIGINVWPLNTVQFSNHTQYGRWTGQVLPPEQIPALVDGIAGIGELGNCDAVLSGYLGSAAQGRAILDVVARIKQANPRALYLCDPVMGHP--EKGCIVAPEVSDFL---LEEAAAVADYLCPNQLELDSFCDRQPNSLADCVEMARSLLARGPRAILVKHLNYPGKAGDTFEMLLVAADQAWH---LQRPLLAFPRQP---VGVGDLASGLFLSRLLLG-DDLRNAFEFTGAAVHEVLLETQACGS-------------YELELVRAQDRIAHPRVRFDAVRL |
| 3KEU Chain:A ((3-312)) | --EECRVLSIQSHVIRGYVGNRAATFPLQVLGFEIDAVNSVQFSNHTGYAHWKGQVLNSDELQELYEGLR-LNNMNKYDYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPE--DLLPVYKEKVVPLADIITPNQFEAELLSGRKIHSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNY--LIVLGSQRR-SVVMERIRMDIRKVDAVFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSTLHHVLQRTIQCAKAQAGEGVRPSPMQLELRMVQSKRDIEDPEIVVQATVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KEU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202132 for 2399 contacts (-84.3/contact) +
2D Compatibility (PS) -29935 + (NN) -6226 + (LL) 416
1D Compatibility (HY) -23200 + (ID) 4700
Total energy: -265777.0 ( -110.79 by residue)
QMean score : 0.510
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