Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVS-VRWYRPGGPLTAQQVGQQYLAIVLGGITKEGV
3ANP Chain:C ((3-196))
---REYQKKRRRERIFRAAMELFRNRGFQETTATEIAKAAHVSRGTFFNYYPYKEAVLLDYGSQLLAGLREEVRRLLAQGREPVEVLRHLFRVLAEGTAREKDLLLPMFYELLNPDPVRARAAFE--ALPLGDLIAEILKPLREQGVLRQDFSLERMGRTLADLYFLSALRWAAYTPGRDLAEELEKNLRLLLEGMLVR--
General information:
TITO was launched using:
RESULT:
Template:
3ANP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81396 for 1366 contacts (-59.6/contact) +
2D Compatibility (PS) -20639 + (NN) -8578 + (LL) 276
1D Compatibility (HY) -8800 + (ID) 1950
Total energy: -121087.0 ( -88.64 by residue)
QMean score : 0.440
(partial model without unconserved sides chains):
PDB file :
Tito_3ANP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ANP-query.scw
PDB file :
Tito_Scwrl_3ANP.pdb
: