Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---MKKITTNEQFNELIQSDKE--IIVKFYADWCPDCTRMNMFIGDILEEYNQN---DWYELN--KDELPDLAEKYQV-MGIPSLLIFKNGEKTAHLHSANAKTPEEVTEFLSEHIS
2TRX Chain:A ((1-108))SDKIIHL-TDDSFDTDVLKAD-GAILVDFWAEWCGPCKMIAPILDEIADEYQ--GKLTVAKLNID--QNPGTAPKYGIR-GIPTLLLFKNGEVAATKVGAL--SKGQLKEFLDANLA


General information:
TITO was launched using:
RESULT:

Template: 2TRX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 397 -74716 -188.20 -770.27
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -188.20
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.755

(partial model without unconserved sides chains):
PDB file : Tito_2TRX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2TRX-query.scw
PDB file : Tito_Scwrl_2TRX.pdb: