Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIREDEVRKLVGEMREPFLQRPLGELDAVKEIKIKPEKRHISVKVALAKTGTAEQMQIQQEIVNVLKGAGAETVGLRFEELPEETVAKFRAPSAEKKTLLNMDNPPVFLAVASGKGGVGKSTVSVNLAISLARLGKKVGLIDADIYGFSVPDMMGIT-VRPT---------IEGEKLLPVERFGVKVMSMGFFVEENAPVVWRGPMLGKMLNNFFHEVEWGEVDYIVLDLPPGTGDVALDVHTMLPSCKEIIVSTPHPTAAFVAARAGSMAIKTDHEVVGVIENMAYYESAKTGEREYVFGKGGGDKLAEELNVPLLGRIPLKQPDWD-KDQFAPSVYDE-NHPIGEIYQDIAKKIDAKMSVQV |
| 1HYQ Chain:A ((2-233)) | ---------------------------------------------------------------------------------------------------------VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITMANLELILGMEGLPVTLQNVLAGEARIDEAIYV-GPGGVKVVPAGVSLEG-----LR-KANPEKLEDVLTQIM-ESTDILLLDAPAGLERSAVIAIA--AAQELLLVVNPEISSITDGLKTKIVAERLGTKVLGVVVNRITTL--GI--------EMAKNEIEAILEAKVIGLIPEDPEVRRAAAYGKPVVLRSPNSPAARAIVELANYIA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HYQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120895 for 1933 contacts (-62.5/contact) +
2D Compatibility (PS) -23251 + (NN) -3599 + (LL) 10964
1D Compatibility (HY) -8400 + (ID) 2750
Total energy: -147931.0 ( -76.53 by residue)
QMean score : 0.439
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