Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIREDEVRKLVGEMREPFLQRPLGELDAVKEIKIKPEKRHISVKVALAKTGTAEQMQIQQEIVNVLKGAGAETVGLRFEELPEETVAKFRAPSAEKKTLLNMDNPPVFLAVASGKGGVGKSTVSVNLAISLARLGKKVGLIDADIYGFSVPDMMGIT-VR-PT---I------EGEKLLP-VERFGVKVMSMGFFVEENAPVVWRGPMLGKMLNNFFHEVE-WGEVDYIVLDLPPGTGDVALDVHTMLPSCKEIIVSTPHPTAAFVAARAGSMAIKTDHEVVGVIENMAYYESAKTGEREYVFGKGGGDKLAEELNVPLLGRIPLKQPDWD-KDQFAPSVYDENHPIGEIYQDIAKKIDAKMSVQV |
4V03 Chain:A ((2-244)) | ---------------------------------------------------------------------------------------------------------AEVIVITSGKGGVGKTTLTANIGTALAKLGKKVLLIDAD---RNLDMILGLENRIVYDILDVLEGRVPYEKALVKDKRGLSLWLLP---------------VIDIEKWNKTVEEIKNSGNYDYILVDSPAGIEKGFQIAVS--PADKALIVVNPEVSSIRDADRVIGLLESMDKRNYKVIVNRIKWE--MVKR----GAMLSVEDIVDILKAEIIGIIPEEPKLVDFTNRGEPIVLDEKFPASQAIIDTARRLMGESI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114867 for 1854 contacts (-62.0/contact) +
2D Compatibility (PS) -23337 + (NN) -8218 + (LL) 11416
1D Compatibility (HY) -8000 + (ID) 2850
Total energy: -145856.0 ( -78.67 by residue)
QMean score : 0.452
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