Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRSQKVILTNMCLIEDNKGRIVMQIRDPKRYSWSGAALPGGHIEEGESLYDALVREVHEETGLTISNPKLVGMKHWY-TDEGIRYLVFLYKTYDFSGELQSSDEGDVVWIERSQLDKIEL-AYDMLNLLRVFDEDDISEMFYSKRLEDGFIRKFY-----
3Q93 Chain:A ((23-176))
----ASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGF---GGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV
General information:
TITO was launched using:
RESULT:
Template:
3Q93.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46442 for 1079 contacts (-43.0/contact) +
2D Compatibility (PS) -15435 + (NN) -1824 + (LL) 432
1D Compatibility (HY) -4400 + (ID) 1550
Total energy: -69219.0 ( -64.15 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_3Q93.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q93-query.scw
PDB file :
Tito_Scwrl_3Q93.pdb
: