Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIREDEVRKLVGEMREPFLQRPLGELDAVKEIKIKPEKRHISVKVALAKTGTAEQMQIQQEIVNVLKGAGAETVGLRFEELPEETVAKFRAPSAEKKTLLNMDNPPVFLAVASGKGGVGKSTVSVNLAISLARLGKKVGLIDADIYGFSVPDMMGIT-VRP----TIEGEKLLPVE----RFGVKVMSMGFFVEENAPVVWRGPMLGKMLNNFFHEVEWGEVDYIVLDLPPGTGDVALDVHTMLPSCKEIIVSTPHPTAAFVAARAGSMAIKTDHEVVGVIENMAYYESAKT--GEREYVFGKGGGDKLAEELNVPLLGRIPLKQPDWD-KDQFAPSVYDENHPIGEIYQDIAKKIDAKMSVQV |
| 2PH1 Chain:A ((13-246)) | ----------------------------------------------------------------------------------------------------RLGKIKSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFLGPSIPILFGLRNARIAVSAEGLEPVLTQKYGIKVMSMQFLLPKENT-----PVIWRGPLIAGMIREFLGRVAWGELDHLLIDLPPGTGDAPLTVMQDAKPTGVVVVSTPQELTAVIVEKAINMAEETNTSVLGLVENMSYFV--CPNCGHKSYIFGEGKGESLAKKYNIGFFTSIPIEEELIKLADSGRIEEYEK----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106058 for 1819 contacts (-58.3/contact) +
2D Compatibility (PS) -23781 + (NN) -6303 + (LL) 11252
1D Compatibility (HY) -16400 + (ID) 4100
Total energy: -145390.0 ( -79.93 by residue)
QMean score : 0.426
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