Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVFATPVK
4BEM Chain:A ((7-82))
--DFIKACSAIGAGIAM-IAGVGPGIGQGFAAGKGAEAVGRQPEAQSDIIRTMLLGAAVAETTGIYGLIVALILLFANPFF
General information:
TITO was launched using:
RESULT:
Template:
4BEM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37368 for 440 contacts (-84.9/contact) +
2D Compatibility (PS) -7412 + (NN) 1332 + (LL) 276
1D Compatibility (HY) 3200 + (ID) 650
Total energy: -40622.0 ( -92.32 by residue)
QMean score : 0.029
(partial model without unconserved sides chains):
PDB file :
Tito_4BEM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BEM-query.scw
PDB file :
Tito_Scwrl_4BEM.pdb
: